genes

Autism study reveals how a genetic variant rewires the brain

December, 2010

An imaging study has revealed how one of the many genes implicated in autism is associated with an atypical pattern of connectivity between the hemispheres and within and from the frontal lobe.

Many genes have been implicated in autism; one of them is the CNTNAP2 gene. This gene (which is also implicated in specific language disorder) is most active during brain development in the frontal lobe. An imaging study involving 32 children, half of whom had autism, has revealed that regardless of their diagnosis, the children carrying the risk variant showed communication problems within and with the frontal lobe. The frontal lobe was over-connected to itself and poorly connected to the rest of the brain, particularly the back of the brain.

There were also differences in connectivity between the left and right sides of the brain — in those with the non-risk gene, communication pathways in the frontal lobe linked more strongly to the left side of the brain (which is more strongly involved in language), but in those with the risk variant, the communications pathways connected more broadly to both sides of the brain.

The findings could lead to earlier detection of autism, and new interventions to strengthen connections between the frontal lobe and left side of the brain. But it should be emphasized that the autistic spectrum disorders probably encompass a number of different genetic patterns associated with different variants of ASD.

It should also be emphasized that this gene variant, although it increases the risk of various neurodevelopmental disorders (such as specific language impairment, which has also been associated with this gene), is found among a third of the population. So the pattern of connectivity, although not ‘normal’ (i.e., the majority position), is not abnormal. It would be interesting to explore whether other, more subtle, cognitive differences correlate with this genetic difference.

Reference: 

Scott-Van Zeeland., A.A. et al. 2010. Altered Functional Connectivity in Frontal Lobe Circuits Is Associated with Variation in the Autism Risk Gene CNTNAP2. Science Translational Medicine, 2 (56), DOI: 10.1126/scitranslmed.3001344 http://stm.sciencemag.org/content/2/56/56ra80.abstract

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How the Alzheimer’s gene works; implications for treatment

November, 2010

Research with genetically engineered mice shows why the apoE4 gene is so strongly associated with Alzheimer’s, and points to strategies for countering its effects.

Carriers of the so-called ‘Alzheimer’s gene’ (apoE4) comprise 65% of all Alzheimer's cases. A new study helps us understand why that’s true. Genetically engineered mice reveal that apoE4 is associated with the loss of GABAergic interneurons in the hippocampus. This is consistent with low levels of GABA (produced by these neurons) typically found in Alzheimer’s brains. This loss was associated with cognitive impairment in the absence of amyloid beta accumulation, demonstrating it is an independent factor in the development of this disease.

The relationship with the other major characteristic of the Alzheimer’s brain, tau tangles, was not independent. When the mice’s tau protein was genetically eliminated, the mice stopped losing GABAergic interneurons, and did not develop cognitive deficits. Previous research has shown that suppressing tau protein can also prevent amyloid beta from causing memory deficits.

Excitingly, daily injections of pentobarbital, a compound that enhances GABA action, restored cognitive function in the mice.

The findings suggest that increasing GABA signaling and reducing tau are potential strategies to treat or prevent apoE4-related Alzheimer's disease.

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Face-blindness an example of inability to generalize

October, 2010

It seems that prosopagnosia can be, along with perfect pitch and eidetic memory, an example of what happens when your brain can’t abstract the core concept.

‘Face-blindness’ — prosopagnosia — is a condition I find fascinating, perhaps because I myself have a touch of it (it’s now recognized that this condition represents the end of a continuum rather than being an either/or proposition). The intriguing thing about this inability to recognize faces is that, in its extreme form, it can nevertheless exist side-by-side with quite normal recognition of other objects.

Prosopagnosia that is not the result of brain damage often runs in families, and a study of three family members with this condition has revealed that in some cases at least, the inability to remember faces has to do with failing to form a mental representation that abstracts the essence of the face, sans context. That is, despite being fully able to read facial expressions, attractiveness and gender from the face (indeed one of the family members is an artist who has no trouble portraying fully detailed faces), they couldn’t cope with changes in lighting conditions and viewing angles.

I’m reminded of the phenomenon of perfect pitch, which is characterized by an inability to generalize across acoustically similar tones, so an A in a different key is a completely different note. Interestingly, like prosopagnosia, perfect pitch is now thought to be more common than has been thought (recognition of it is of course limited by the fact that some musical expertise is generally needed to reveal it). This inability to abstract or generalize is also a phenomenon of eidetic memory, and I have spoken before of the perils of this.

(Note: A fascinating account of what it is like to be face-blind, from a person with the condition, can be found at: http://www.choisser.com/faceblind/)

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Low grades in adolescence linked to dopamine genes

October, 2010

A large American study of middle- and high-school students has found lower academic performance in core subjects was associated with three dopamine gene variants

Analysis of DNA and lifestyle data from a representative group of 2,500 U.S. middle- and high-school students tracked from 1994 to 2008 in the National Longitudinal Study of Adolescent Health has revealed that lower academic performance was associated with three dopamine gene variants. Having more of the dopamine gene variants (three rather than one, say) was associated with a significantly lower GPA.

Moreover, each of the dopamine genes (on its own) was linked to specific deficits: there was a marginally significant negative effect on English grades for students with a specific variant in the DAT1 gene, but no apparent effect on math, history or science; a specific variant in the DRD2 gene was correlated with a markedly negative effect on grades in all four subjects; those with the deleterious DRD4 variant had significantly lower grades in English and math, but only marginally lower grades in history and science.

Precisely why these specific genes might impact academic performance isn’t known with any surety, but they have previously been linked to such factors as adolescent delinquency, working memory, intelligence and cognitive abilities, and ADHD, among others.

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Light shed on the cause of the most common learning disability

September, 2010

The discovery that the mutated NF1 gene inhibits working memory through too much GABA in the prefrontal cortex offers hope for an effective therapy for those with the most common learning disability.

Neurofibromatosis type 1 (NF1) is the most common cause of learning disabilities, caused by a mutation in a gene that makes a protein called neurofibromin. Mouse research has now revealed that these mutations are associated with higher levels of the inhibitory neurotransmitter GABA in the medial prefrontal cortex. Brain imaging in humans with NF1 similarly showed reduced activity in the prefrontal cortex when performing a working memory task, with the levels of activity correlating with task performance. It seems, therefore, that this type of learning disability is a result of too much GABA in the prefrontal cortex inhibiting the activity of working memory. Potentially they could be corrected with a drug that normalizes the excess GABA's effect. The researchers are currently studying the effect of the drug lovastatin on NF1 patients.

Reference: 

[1688] Shilyansky, C., Karlsgodt K. H., Cummings D. M., Sidiropoulou K., Hardt M., James A. S., et al.
(2010).  Neurofibromin regulates corticostriatal inhibitory networks during working memory performance.
Proceedings of the National Academy of Sciences. 107(29), 13141 - 13146.

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Link among Alzheimer's disease, Down syndrome, atherosclerosis and diabetes

January, 2010

New evidence suggests that Down syndrome, Alzheimer's, diabetes, and cardiovascular disease, all share a common disease mechanism.

It’s been suggested before that Down syndrome and Alzheimer's are connected. Similarly, there has been evidence for connections between diabetes and Alzheimer’s, and cardiovascular disease and Alzheimer’s. Now new evidence shows that all of these share a common disease mechanism. According to animal and cell-culture studies, it seems all Alzheimer's disease patients harbor some cells with three copies of chromosome 21, known as trisomy 21, instead of the usual two. Trisomy 21 is characteristic of all the cells in people with Down syndrome. By age 30 to 40, all people with Down syndrome develop the same brain pathology seen in Alzheimer's. It now appears that amyloid protein is interfering with the microtubule transport system inside cells, essentially creating holes in the roads that move everything, including chromosomes, around inside the cells. Incorrect transportation of chromosomes when cells divide produces new cells with the wrong number of chromosomes and an abnormal assortment of genes. The beta amyloid gene is on chromosome 21; thus, having three copies produces extra beta amyloid. The damage to the microtubule network also interferes with the receptor needed to pull low-density lipoprotein (LDL — the ‘bad’ cholesterol) out of circulation, thus (probably) allowing bad cholesterol to build up (note that the ‘Alzheimer’s gene’ governs the low-density lipoprotein receptor). It is also likely that insulin receptors are unable to function properly, leading to diabetes.

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Face recognition ability inherited separately from IQ

January, 2010

Providing support for a modular concept of the brain, a twin study has found that face recognition is heritable, and that it is inherited separately from IQ.

No surprise to me (I’m hopeless at faces), but a twin study has found that face recognition is heritable, and that it is inherited separately from IQ. The findings provide support for a modular concept of the brain, suggesting that some cognitive abilities, like face recognition, are shaped by specialist genes rather than generalist genes. The study used 102 pairs of identical twins and 71 pairs of fraternal twins aged 7 to 19 from Beijing schools to calculate that 39% of the variance between individuals on a face recognition task is attributable to genetic effects. In an independent sample of 321 students, the researchers found that face recognition ability was not correlated with IQ.

Reference: 

Zhu, Q. et al. 2010. Heritability of the specific cognitive ability of face perception. Current Biology, 20 (2), 137-142.

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Mother’s Alzheimer’s greater risk factor than father’s

March, 2010

A brain scanning study adds to evidence that having a mother with Alzheimer’s is a greater risk factor than having a father with Alzheimer’s.

A brain scanning study using Pittsburgh Compound B, involving 42 healthy individuals (aged 50-80), of whom 14 had mothers who developed Alzheimer's, 14 had fathers with Alzheimer's, and 14 had no family history of the disease, has found that those with a maternal history had 15% more amyloid-beta plaques than those with a paternal history, and 20% more than those with no family history. The findings add to evidence that having a mother with Alzheimer’s is a greater risk factor than having a father with Alzheimer’s. The groups did not differ in age, gender, education, or apolipoprotein E (ApoE) status.

Reference: 

[335] Mosconi, L., Rinne J. O., Tsui W. H., Berti V., Li Y., Wang H Y., et al.
(2010).  Increased fibrillar amyloid-β burden in normal individuals with a family history of late-onset Alzheimer’s.
Proceedings of the National Academy of Sciences. 107(13), 5949 - 5954.

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Factors predicting conversion of mild cognitive impairment to Alzheimer’s identified

March, 2010

New analysis reveals the most important factors for predicting whether amnestic-MCI would develop into Alzheimer’s within 2 years were hyperglycemia, female gender and having the Alzheimer's gene.

An analysis technique using artificial neural networks has revealed that the most important factors for predicting whether amnestic mild cognitive impairment (MCI-A) would develop into Alzheimer’s within 2 years were hyperglycemia, female gender and having the APOE4 gene (in that order). These were followed by the scores on attentional and short memory tests.

Reference: 

Tabaton, M. et al. 2010. Artificial Neural Networks Identify the Predictive Values of Risk Factors on the Conversion of Amnestic Mild Cognitive Impairment. Journal of Alzheimer's Disease, 19 (3), 1035-1040.

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New gene associated with increased risk of Alzheimer's

April, 2010

Another gene has been identified that appears to increase risk of Alzheimer’s. The gene is involved in influencing the body's levels of homocysteine (high levels are known to be a strong risk factor), and have also been implicated in coronary artery disease.

Another gene has been identified that appears to increase risk of Alzheimer’s. The gene, MTHFD1L, is located on chromosome six. Comparison of the genomes of 2,269 people with late-onset Alzheimer's disease and 3,107 people without the disease found those with a particular variation in this gene were almost twice as likely to develop Alzheimer's disease as those people without the variation. The gene is involved in influencing the body's levels of homocysteine (high levels are known to be a strong risk factor), and have also been implicated in coronary artery disease.

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The results were presented at the American Academy of Neurology's 62nd Annual Meeting in Toronto, April 10–17, 2010.

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